WormBase Tree Display for Variation: WBVar01831399
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WBVar01831399 | Name | Public_name | WBVar01831399 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00543580 | |||||||
CE22547:p.Asp84= | ||||||||
Y55F3AM.1.1:c.252C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.1057205C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55F3AM | ||||
Flanking_sequences | CAAAATTCTACTAAAAAATGTTTCAGACGA | GGCCGGGAAGTGCTATTCGACTTGGACGGC | ||||||
Mapping_target | Y55F3AM | |||||||
Source_location | 225 | CHROMOSOME_IV | 1057205 | 1057205 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021920 | ||||||
Transcript | Y55F3AM.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y55F3AM.1.1:c.252C>T | |||||||
HGVSp | CE22547:p.Asp84= | |||||||
cDNA_position | 265 | |||||||
CDS_position | 252 | |||||||
Protein_position | 84 | |||||||
Exon_number | 3/5 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |