WormBase Tree Display for Variation: WBVar01830390
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WBVar01830390 | Name | Public_name | WBVar01830390 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00542501 | |||||||
F39C12.1.1:c.15180T>C | ||||||||
CE53186:p.Cys5060= | ||||||||
HGVSg | CHROMOSOME_X:g.4835175A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | TTTCAAATGCTTTGTCTGCTTCGATCGTTG | CAACGACAGTCGCAACCGGCTACCGGGCAA | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4835145 | 4835145 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018193 | ||||||
Transcript | F39C12.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F39C12.1.1:c.15180T>C | |||||||
HGVSp | CE53186:p.Cys5060= | |||||||
cDNA_position | 15310 | |||||||
CDS_position | 15180 | |||||||
Protein_position | 5060 | |||||||
Exon_number | 30/31 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
Method | WGS_Flibotte |