WormBase Tree Display for Variation: WBVar01827440
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WBVar01827440 | Name | Public_name | WBVar01827440 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00539449 | |||||||
W04B5.3c.1:c.*455C>A | ||||||||
W04B5.3b.1:c.1164C>A | ||||||||
W04B5.3a.1:c.1164C>A | ||||||||
CE30200:p.Ala388= | ||||||||
CE29362:p.Ala388= | ||||||||
HGVSg | CHROMOSOME_III:g.2423064C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | W04B5 | ||||
Flanking_sequences | AACTACAGTAGTCCCATATTCGTATCCTGC | GTTCAACCGTATCCCATGTACCAACAGTAT | ||||||
Mapping_target | W04B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 2423054 | 2423054 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021020 | ||||||
Transcript | W04B5.3a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | W04B5.3a.1:c.1164C>A | |||||||
HGVSp | CE29362:p.Ala388= | |||||||
cDNA_position | 1210 | |||||||
CDS_position | 1164 | |||||||
Protein_position | 388 | |||||||
Exon_number | 11/14 | |||||||
Codon_change | gcC/gcA | |||||||
Amino_acid_change | A | |||||||
W04B5.3c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W04B5.3c.1:c.*455C>A | |||||||
cDNA_position | 1632 | |||||||
Exon_number | 11/13 | |||||||
W04B5.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | W04B5.3b.1:c.1164C>A | |||||||
HGVSp | CE30200:p.Ala388= | |||||||
cDNA_position | 1164 | |||||||
CDS_position | 1164 | |||||||
Protein_position | 388 | |||||||
Exon_number | 10/12 | |||||||
Codon_change | gcC/gcA | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |