WormBase Tree Display for Variation: WBVar01827354
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WBVar01827354 | Name | Public_name | WBVar01827354 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00539363 | |||||||
W04B5.3b.1:c.22-4C>T | ||||||||
W04B5.3a.1:c.22-4C>T | ||||||||
W04B5.3c.1:c.22-4C>T | ||||||||
HGVSg | CHROMOSOME_III:g.2419132C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | W04B5 | ||||
Flanking_sequences | GACGCAAATTTTCGACAAAGTCAATAATTT | CAGACAATGCCGTTCCGTCGGGACATTCCA | ||||||
Mapping_target | W04B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 2419122 | 2419122 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021020 | ||||||
Transcript | W04B5.3a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | W04B5.3a.1:c.22-4C>T | |||||||
Intron_number | 2/13 | |||||||
W04B5.3c.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | W04B5.3c.1:c.22-4C>T | |||||||
Intron_number | 2/12 | |||||||
W04B5.3b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | W04B5.3b.1:c.22-4C>T | |||||||
Intron_number | 1/11 | |||||||
Method | WGS_Flibotte |