WormBase Tree Display for Variation: WBVar01820576
expand all nodes | collapse all nodes | view schema
WBVar01820576 | Name | Public_name | WBVar01820576 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00532235 | |||||||
CE52603:p.Leu47= | ||||||||
C05G5.2b.1:c.141G>A | ||||||||
CE05225:p.Leu47= | ||||||||
C05G5.2a.1:c.141G>A | ||||||||
HGVSg | CHROMOSOME_X:g.14747533G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C05G5 | ||||
Flanking_sequences | GACACAAGTCGAGCGTAAAGCCAATGATTT | GAAAAGTTTTCGAGACTTGTAGCATTACGA | ||||||
Mapping_target | C05G5 | |||||||
Source_location | 225 | CHROMOSOME_X | 14747464 | 14747464 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007348 | ||||||
Transcript | C05G5.2a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C05G5.2a.1:c.141G>A | |||||||
HGVSp | CE05225:p.Leu47= | |||||||
cDNA_position | 178 | |||||||
CDS_position | 141 | |||||||
Protein_position | 47 | |||||||
Exon_number | 3/12 | |||||||
Codon_change | ttG/ttA | |||||||
Amino_acid_change | L | |||||||
C05G5.2b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C05G5.2b.1:c.141G>A | |||||||
HGVSp | CE52603:p.Leu47= | |||||||
cDNA_position | 178 | |||||||
CDS_position | 141 | |||||||
Protein_position | 47 | |||||||
Exon_number | 3/12 | |||||||
Codon_change | ttG/ttA | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |