WormBase Tree Display for Variation: WBVar01817611
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WBVar01817611 | Name | Public_name | WBVar01817611 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00529099 | |||||||
CE42182:p.Cys1204= | ||||||||
Y110A2AL.8b.1:c.3594T>C | ||||||||
CE37163:p.Cys1195= | ||||||||
Y110A2AL.8c.1:c.3612T>C | ||||||||
CE37164:p.Cys1198= | ||||||||
Y110A2AL.8a.1:c.3585T>C | ||||||||
HGVSg | CHROMOSOME_II:g.2846158A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y110A2AL | ||||
Flanking_sequences | AGCAGTGAACTCGACACCGATTCCGACGGC | CAGATGAGGGTTACAGCGGAAATCGGGTTC | ||||||
Mapping_target | Y110A2AL | |||||||
Source_location | 225 | CHROMOSOME_II | 2846163 | 2846163 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004210 | ||||||
Transcript | Y110A2AL.8b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8b.1:c.3594T>C | |||||||
HGVSp | CE37164:p.Cys1198= | |||||||
cDNA_position | 3675 | |||||||
CDS_position | 3594 | |||||||
Protein_position | 1198 | |||||||
Exon_number | 13/15 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
Y110A2AL.8a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8a.1:c.3585T>C | |||||||
HGVSp | CE37163:p.Cys1195= | |||||||
cDNA_position | 3666 | |||||||
CDS_position | 3585 | |||||||
Protein_position | 1195 | |||||||
Exon_number | 13/15 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
Y110A2AL.8c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y110A2AL.8c.1:c.3612T>C | |||||||
HGVSp | CE42182:p.Cys1204= | |||||||
cDNA_position | 3612 | |||||||
CDS_position | 3612 | |||||||
Protein_position | 1204 | |||||||
Exon_number | 12/13 | |||||||
Codon_change | tgT/tgC | |||||||
Amino_acid_change | C | |||||||
Method | WGS_Flibotte |