WormBase Tree Display for Variation: WBVar01794351
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WBVar01794351 | Name | Public_name | WBVar01794351 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00496707 | |||||||
F45G2.2b.3:c.864C>T | ||||||||
CE37971:p.Tyr288= | ||||||||
CE28727:p.Tyr1133= | ||||||||
F45G2.2a.1:c.3399C>T | ||||||||
F45G2.2b.1:c.864C>T | ||||||||
F45G2.2b.2:c.864C>T | ||||||||
HGVSg | CHROMOSOME_III:g.13422561C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | ||||
Flanking_sequences | ACGACAGTTCAATGAGCTCCGTTCTGAATA | GAAGTTCTCCAAGAGCAAATGGCTGAAGCT | ||||||
Mapping_target | F45G2 | |||||||
Source_location | 225 | CHROMOSOME_III | 13422460 | 13422460 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009730 | ||||||
Transcript | F45G2.2b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F45G2.2b.1:c.864C>T | |||||||
HGVSp | CE37971:p.Tyr288= | |||||||
cDNA_position | 996 | |||||||
CDS_position | 864 | |||||||
Protein_position | 288 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | taC/taT | |||||||
Amino_acid_change | Y | |||||||
F45G2.2b.3 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F45G2.2b.3:c.864C>T | |||||||
HGVSp | CE37971:p.Tyr288= | |||||||
cDNA_position | 1805 | |||||||
CDS_position | 864 | |||||||
Protein_position | 288 | |||||||
Exon_number | 8/10 | |||||||
Codon_change | taC/taT | |||||||
Amino_acid_change | Y | |||||||
F45G2.2b.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F45G2.2b.2:c.864C>T | |||||||
HGVSp | CE37971:p.Tyr288= | |||||||
cDNA_position | 2899 | |||||||
CDS_position | 864 | |||||||
Protein_position | 288 | |||||||
Exon_number | 20/22 | |||||||
Codon_change | taC/taT | |||||||
Amino_acid_change | Y | |||||||
F45G2.2a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F45G2.2a.1:c.3399C>T | |||||||
HGVSp | CE28727:p.Tyr1133= | |||||||
cDNA_position | 3544 | |||||||
CDS_position | 3399 | |||||||
Protein_position | 1133 | |||||||
Exon_number | 23/25 | |||||||
Codon_change | taC/taT | |||||||
Amino_acid_change | Y | |||||||
Method | WGS_Flibotte |