WormBase Tree Display for Variation: WBVar01794348
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WBVar01794348 | Name | Public_name | WBVar01794348 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00496704 | |||||||
F45G2.2a.1:c.2296-523A>C | ||||||||
F45G2.2b.2:c.-240-523A>C | ||||||||
F45G2.2b.3:c.-763A>C | ||||||||
HGVSg | CHROMOSOME_III:g.13419662A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | ||||
Flanking_sequences | GAAGCTTTTGACGTCGAACAAATCTTTTTA | TTTTGCGAAAATTGAATGATGCCCTACATT | ||||||
Mapping_target | F45G2 | |||||||
Source_location | 225 | CHROMOSOME_III | 13419561 | 13419561 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009730 | ||||||
Transcript | F45G2.2b.3 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45G2.2b.3:c.-763A>C | |||||||
cDNA_position | 179 | |||||||
Exon_number | 1/10 | |||||||
F45G2.2b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45G2.2b.2:c.-240-523A>C | |||||||
Intron_number | 12/21 | |||||||
F45G2.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45G2.2a.1:c.2296-523A>C | |||||||
Intron_number | 16/24 | |||||||
Method | WGS_Flibotte |