WormBase Tree Display for Variation: WBVar01794347
expand all nodes | collapse all nodes | view schema
WBVar01794347 | Name | Public_name | WBVar01794347 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00496703 | |||||||
CE28727:p.Phe646= | ||||||||
F45G2.2b.2:c.-598C>T | ||||||||
F45G2.2a.1:c.1938C>T | ||||||||
HGVSg | CHROMOSOME_III:g.13413922C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F45G2 | ||||
Flanking_sequences | GGCAAAGAAGAAGGGAAAATCTGCATCGTT | CTTACTGTTTCGACTATGTACAGAGAATCA | ||||||
Mapping_target | F45G2 | |||||||
Source_location | 225 | CHROMOSOME_III | 13413821 | 13413821 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009730 | ||||||
Transcript | F45G2.2b.2 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F45G2.2b.2:c.-598C>T | |||||||
cDNA_position | 1438 | |||||||
Exon_number | 10/22 | |||||||
F45G2.2a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F45G2.2a.1:c.1938C>T | |||||||
HGVSp | CE28727:p.Phe646= | |||||||
cDNA_position | 2083 | |||||||
CDS_position | 1938 | |||||||
Protein_position | 646 | |||||||
Exon_number | 14/25 | |||||||
Codon_change | ttC/ttT | |||||||
Amino_acid_change | F | |||||||
Method | WGS_Flibotte |