WormBase Tree Display for Variation: WBVar01792430
expand all nodes | collapse all nodes | view schema
WBVar01792430 | Name | Public_name | WBVar01792430 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00494715 | |||||||
Y71D11A.5.1:c.850C>T | ||||||||
Y71D11A.3b.1:c.417+6116G>A | ||||||||
CE29908:p.Leu284= | ||||||||
Y71D11A.3a.1:c.417+6116G>A | ||||||||
HGVSg | CHROMOSOME_III:g.1128894G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71D11A | ||||
Flanking_sequences | TCCAAAAAAACTTACATATACAAATAGTTA | ATACGTAGGTAAATACGCCTGCAAAATATA | ||||||
Mapping_target | Y71D11A | |||||||
Source_location | 225 | CHROMOSOME_III | 1128884 | 1128884 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022106 | ||||||
WBGene00022104 | ||||||||
Transcript | Y71D11A.3b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71D11A.3b.1:c.417+6116G>A | |||||||
Intron_number | 5/9 | |||||||
Y71D11A.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71D11A.3a.1:c.417+6116G>A | |||||||
Intron_number | 6/9 | |||||||
Y71D11A.5.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y71D11A.5.1:c.850C>T | |||||||
HGVSp | CE29908:p.Leu284= | |||||||
cDNA_position | 908 | |||||||
CDS_position | 850 | |||||||
Protein_position | 284 | |||||||
Exon_number | 9/14 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |