WormBase Tree Display for Variation: WBVar01771016
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WBVar01771016 | Name | Public_name | WBVar01771016 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00471420 | |||||||
H14E04.3.1:c.117C>T | ||||||||
CE20968:p.Ala39= | ||||||||
HGVSg | CHROMOSOME_III:g.2386463G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | ||||
Flanking_sequences | CCACTGAATATCCGCCTCCACAGTTTCGGT | GCGACGAGCTCAAAAGCTATTCGGAGCATG | ||||||
Mapping_target | H14E04 | |||||||
Source_location | 225 | CHROMOSOME_III | 2386453 | 2386453 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019200 | ||||||
Transcript | H14E04.3.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | H14E04.3.1:c.117C>T | |||||||
HGVSp | CE20968:p.Ala39= | |||||||
cDNA_position | 121 | |||||||
CDS_position | 117 | |||||||
Protein_position | 39 | |||||||
Exon_number | 2/8 | |||||||
Codon_change | gcC/gcT | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |