WormBase Tree Display for Variation: WBVar01771006
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WBVar01771006 | Name | Public_name | WBVar01771006 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00471409 | |||||||
H14E04.2b.1:c.176-7C>T | ||||||||
H14E04.2a.1:c.176-16C>T | ||||||||
H14E04.2c.1:c.176-16C>T | ||||||||
HGVSg | CHROMOSOME_III:g.2376499C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | H14E04 | ||||
Flanking_sequences | CACTAAAACTTGATTAAAAATTCCCAATTT | TCCCAGTTTTTTCAGAGTCAACCGCCGATG | ||||||
Mapping_target | H14E04 | |||||||
Source_location | 225 | CHROMOSOME_III | 2376489 | 2376489 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019199 | ||||||
Transcript | H14E04.2a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2a.1:c.176-16C>T | |||||||
Intron_number | 3/11 | |||||||
H14E04.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H14E04.2c.1:c.176-16C>T | |||||||
Intron_number | 3/12 | |||||||
H14E04.2b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | H14E04.2b.1:c.176-7C>T | |||||||
Intron_number | 3/11 | |||||||
Method | WGS_Flibotte |