WormBase Tree Display for Variation: WBVar01770459
expand all nodes | collapse all nodes | view schema
WBVar01770459 | Name | Public_name | WBVar01770459 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00470829 | |||||||
Y82E9BR.16a.1:c.1584G>A | ||||||||
CE54578:p.Ser528= | ||||||||
CE23368:p.Ser114= | ||||||||
Y82E9BR.16b.1:c.342G>A | ||||||||
HGVSg | CHROMOSOME_III:g.1420030C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y82E9BR | ||||
Flanking_sequences | AAGAGGTTGCATTTCATGCGAGCTGCGGTA | GAATCTCCCTCCTCGATCTCTTCAATACTC | ||||||
Mapping_target | Y82E9BR | |||||||
Source_location | 225 | CHROMOSOME_III | 1420022 | 1420022 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022348 | ||||||
Transcript | Y82E9BR.16b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y82E9BR.16b.1:c.342G>A | |||||||
HGVSp | CE23368:p.Ser114= | |||||||
cDNA_position | 342 | |||||||
CDS_position | 342 | |||||||
Protein_position | 114 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | tcG/tcA | |||||||
Amino_acid_change | S | |||||||
Y82E9BR.16a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y82E9BR.16a.1:c.1584G>A | |||||||
HGVSp | CE54578:p.Ser528= | |||||||
cDNA_position | 1595 | |||||||
CDS_position | 1584 | |||||||
Protein_position | 528 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | tcG/tcA | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |