WormBase Tree Display for Variation: WBVar01744126
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WBVar01744126 | Name | Public_name | WBVar01744126 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00443402 | |||||||
CE38513:p.Phe487Ser | ||||||||
CE38512:p.Phe487Ser | ||||||||
F35E12.7b.1:c.1446+62T>C | ||||||||
F35E12.7d.1:c.1460T>C | ||||||||
F35E12.7a.1:c.1460T>C | ||||||||
F35E12.7c.1:c.1460T>C | ||||||||
CE09922:p.Phe487Ser | ||||||||
HGVSg | CHROMOSOME_V:g.13728638A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F35E12 | ||||
Flanking_sequences | GAGACTGAGGTAACTATCGGTGCAGTTGAA | AGCTTCCCGAAGGCTAAAACAAAAGAATGC | ||||||
Mapping_target | F35E12 | |||||||
Source_location | 225 | CHROMOSOME_V | 13728625 | 13728625 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009431 | ||||||
Transcript | F35E12.7c.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F35E12.7c.1:c.1460T>C | |||||||
HGVSp | CE38512:p.Phe487Ser | |||||||
cDNA_position | 1471 | |||||||
CDS_position | 1460 | |||||||
Protein_position | 487 | |||||||
Exon_number | 12/14 | |||||||
Codon_change | tTt/tCt | |||||||
Amino_acid_change | F/S | |||||||
F35E12.7b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F35E12.7b.1:c.1446+62T>C | |||||||
Intron_number | 11/12 | |||||||
F35E12.7a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F35E12.7a.1:c.1460T>C | |||||||
HGVSp | CE09922:p.Phe487Ser | |||||||
cDNA_position | 1463 | |||||||
CDS_position | 1460 | |||||||
Protein_position | 487 | |||||||
Exon_number | 12/14 | |||||||
Codon_change | tTt/tCt | |||||||
Amino_acid_change | F/S | |||||||
F35E12.7d.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F35E12.7d.1:c.1460T>C | |||||||
HGVSp | CE38513:p.Phe487Ser | |||||||
cDNA_position | 1471 | |||||||
CDS_position | 1460 | |||||||
Protein_position | 487 | |||||||
Exon_number | 12/14 | |||||||
Codon_change | tTt/tCt | |||||||
Amino_acid_change | F/S | |||||||
Method | WGS_Flibotte |