WormBase Tree Display for Variation: WBVar01718442
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WBVar01718442 | Name | Public_name | WBVar01718442 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00416493 | |||||||
CE31565:p.Asn54= | ||||||||
K09F6.9.1:c.162C>T | ||||||||
HGVSg | CHROMOSOME_II:g.2282538G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | K09F6 | ||||
Flanking_sequences | ATGAATCCAATAGTTGAGAGGTCGACCAAC | TTTACAAACGAATATGGGTAAATAATATCT | ||||||
Mapping_target | K09F6 | |||||||
Source_location | 225 | CHROMOSOME_II | 2282543 | 2282543 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019592 | ||||||
Transcript | K09F6.9.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | K09F6.9.1:c.162C>T | |||||||
HGVSp | CE31565:p.Asn54= | |||||||
cDNA_position | 162 | |||||||
CDS_position | 162 | |||||||
Protein_position | 54 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
Method | WGS_Flibotte |