WormBase Tree Display for Variation: WBVar01711982
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| WBVar01711982 | Name | Public_name | WBVar01711982 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00409695 | |||||||
| Y71G12B.11c.1:c.985C>T | ||||||||
| Y71G12B.11a.1:c.2974C>T | ||||||||
| Y71G12B.11d.1:c.-153C>T | ||||||||
| CE50474:p.Leu627= | ||||||||
| CE29914:p.Leu992= | ||||||||
| Y71G12B.11b.1:c.*279C>T | ||||||||
| Y71G12B.11e.1:c.1879C>T | ||||||||
| CE46470:p.Leu329= | ||||||||
| HGVSg | CHROMOSOME_I:g.1733363C>T | |||||||
| Sequence_details | SMap | S_parent | Sequence | Y71G12B | ||||
| Flanking_sequences | GTGTATGAGTCTACACAGACCGCCGGGCAC | TGCCAAAGTAAGATTTTGAGATTTTTTGGT | ||||||
| Mapping_target | Y71G12B | |||||||
| Source_location | 225 | CHROMOSOME_I | 1733365 | 1733365 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | C | T | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006771 | ||||||
| Transcript | Y71G12B.11c.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | |||||||
| HGVSc | Y71G12B.11c.1:c.985C>T | |||||||
| HGVSp | CE46470:p.Leu329= | |||||||
| cDNA_position | 1053 | |||||||
| CDS_position | 985 | |||||||
| Protein_position | 329 | |||||||
| Exon_number | 4/7 | |||||||
| Codon_change | Ctg/Ttg | |||||||
| Amino_acid_change | L | |||||||
| Y71G12B.11e.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y71G12B.11e.1:c.1879C>T | |||||||
| HGVSp | CE50474:p.Leu627= | |||||||
| cDNA_position | 1879 | |||||||
| CDS_position | 1879 | |||||||
| Protein_position | 627 | |||||||
| Exon_number | 4/7 | |||||||
| Codon_change | Ctg/Ttg | |||||||
| Amino_acid_change | L | |||||||
| Y71G12B.11a.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | Y71G12B.11a.1:c.2974C>T | |||||||
| HGVSp | CE29914:p.Leu992= | |||||||
| cDNA_position | 2979 | |||||||
| CDS_position | 2974 | |||||||
| Protein_position | 992 | |||||||
| Exon_number | 8/12 | |||||||
| Codon_change | Ctg/Ttg | |||||||
| Amino_acid_change | L | |||||||
| Y71G12B.11d.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y71G12B.11d.1:c.-153C>T | |||||||
| cDNA_position | 132 | |||||||
| Exon_number | 1/6 | |||||||
| Y71G12B.11b.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | Y71G12B.11b.1:c.*279C>T | |||||||
| cDNA_position | 3277 | |||||||
| Exon_number | 10/13 | |||||||
| Method | WGS_Flibotte |
