WormBase Tree Display for Variation: WBVar01711011
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WBVar01711011 | Name | Public_name | WBVar01711011 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00408680 | |||||||
F39C12.1.1:c.13809G>A | ||||||||
CE53186:p.Ala4603= | ||||||||
HGVSg | CHROMOSOME_X:g.4837152C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | TCACTTTTTATACAGTTTATGAATAATGTG | GCCTGATAGGTGATATCCATTTTTTCGTAC | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4837122 | 4837122 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018193 | ||||||
Transcript | F39C12.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F39C12.1.1:c.13809G>A | |||||||
HGVSp | CE53186:p.Ala4603= | |||||||
cDNA_position | 13939 | |||||||
CDS_position | 13809 | |||||||
Protein_position | 4603 | |||||||
Exon_number | 23/31 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |