WormBase Tree Display for Variation: WBVar01707817
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WBVar01707817 | Name | Public_name | WBVar01707817 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00405349 | |||||||
CE54578:p.Ala188Val | ||||||||
Y82E9BR.16a.1:c.563C>T | ||||||||
HGVSg | CHROMOSOME_III:g.1425241G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y82E9BR | ||||
Flanking_sequences | TGAGAGAATCCGGTTCCGGCACGGGCAAGA | CATAGAGCCACCAGTATGGAGCAATTGCGA | ||||||
Mapping_target | Y82E9BR | |||||||
Source_location | 225 | CHROMOSOME_III | 1425233 | 1425233 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022348 | ||||||
Transcript | Y82E9BR.16a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | Y82E9BR.16a.1:c.563C>T | |||||||
HGVSp | CE54578:p.Ala188Val | |||||||
cDNA_position | 574 | |||||||
CDS_position | 563 | |||||||
Protein_position | 188 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | gCt/gTt | |||||||
Amino_acid_change | A/V | |||||||
Method | WGS_Flibotte |