WormBase Tree Display for Variation: WBVar01704596
expand all nodes | collapse all nodes | view schema
WBVar01704596 | Name | Public_name | WBVar01704596 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00401995 | |||||||
CE40156:p.Gln2146Ter | ||||||||
F12B6.1b.1:c.6325C>T | ||||||||
F12B6.1a.1:c.6436C>T | ||||||||
CE49736:p.Gln2109Ter | ||||||||
HGVSg | CHROMOSOME_I:g.2256157G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F12B6 | ||||
Flanking_sequences | TATGAAAAAGAAATCACAGGAAATTTTATT | ATCGGATCCATGAATCACATATGTTGACGC | ||||||
Mapping_target | F12B6 | |||||||
Source_location | 225 | CHROMOSOME_I | 2256159 | 2256159 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000020 | ||||||
Transcript | F12B6.1a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | F12B6.1a.1:c.6436C>T | |||||||
HGVSp | CE40156:p.Gln2146Ter | |||||||
cDNA_position | 6436 | |||||||
CDS_position | 6436 | |||||||
Protein_position | 2146 | |||||||
Exon_number | 33/34 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
F12B6.1b.1 | VEP_consequence | stop_gained | ||||||
VEP_impact | HIGH | |||||||
HGVSc | F12B6.1b.1:c.6325C>T | |||||||
HGVSp | CE49736:p.Gln2109Ter | |||||||
cDNA_position | 6325 | |||||||
CDS_position | 6325 | |||||||
Protein_position | 2109 | |||||||
Exon_number | 33/33 | |||||||
Codon_change | Caa/Taa | |||||||
Amino_acid_change | Q/* | |||||||
Method | WGS_Flibotte |