WormBase Tree Display for Variation: WBVar01698897
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WBVar01698897 | Name | Public_name | WBVar01698897 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00395692 | |||||||
CE42113:p.Lys72= | ||||||||
F40G9.5.1:c.216G>A | ||||||||
HGVSg | CHROMOSOME_III:g.183623G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F40G9 | ||||
Flanking_sequences | AGAGTTTAAAGGGCATTTTGAGGATATTAA | AGGTCTGGGAAACTTTTTTGAATTTTTGAA | ||||||
Mapping_target | F40G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 183622 | 183622 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018241 | ||||||
Transcript | F40G9.5.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F40G9.5.1:c.216G>A | |||||||
HGVSp | CE42113:p.Lys72= | |||||||
cDNA_position | 2298 | |||||||
CDS_position | 216 | |||||||
Protein_position | 72 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |