WormBase Tree Display for Variation: WBVar01698861
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WBVar01698861 | Name | Public_name | WBVar01698861 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00395656 | |||||||
F40G9.15.1:c.126G>A | ||||||||
CE54172:p.Glu42= | ||||||||
F40G9.5.1:c.-840G>A | ||||||||
HGVSg | CHROMOSOME_III:g.182505G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F40G9 | ||||
Flanking_sequences | AAAATTCCAATACAAAATGATTATTTACGA | TGGGACAAGTACAATGGGTGAGATTCGCTG | ||||||
Mapping_target | F40G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 182504 | 182504 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00018241 | ||||||
WBGene00077531 | ||||||||
Transcript | F40G9.15.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F40G9.15.1:c.126G>A | |||||||
HGVSp | CE54172:p.Glu42= | |||||||
cDNA_position | 126 | |||||||
CDS_position | 126 | |||||||
Protein_position | 42 | |||||||
Exon_number | 1/5 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
F40G9.5.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F40G9.5.1:c.-840G>A | |||||||
cDNA_position | 1243 | |||||||
Exon_number | 1/7 | |||||||
Method | WGS_Flibotte |