WormBase Tree Display for Variation: WBVar01698008
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WBVar01698008 | Name | Public_name | WBVar01698008 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00394798 | |||||||
C29F9.6.2:c.408T>C | ||||||||
CE43673:p.Val136= | ||||||||
C29F9.6.1:c.408T>C | ||||||||
C29F9.6.3:c.408T>C | ||||||||
HGVSg | CHROMOSOME_III:g.116132T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | AGGAACCTCACAACCGTGGCACAGTGAAGT | CCGAAAACCGATAGAGAGGCAGTTATTGAG | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 116131 | 116131 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016221 | ||||||
Transcript | C29F9.6.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.1:c.408T>C | |||||||
HGVSp | CE43673:p.Val136= | |||||||
cDNA_position | 580 | |||||||
CDS_position | 408 | |||||||
Protein_position | 136 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
C29F9.6.3 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.3:c.408T>C | |||||||
HGVSp | CE43673:p.Val136= | |||||||
cDNA_position | 503 | |||||||
CDS_position | 408 | |||||||
Protein_position | 136 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
C29F9.6.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.2:c.408T>C | |||||||
HGVSp | CE43673:p.Val136= | |||||||
cDNA_position | 555 | |||||||
CDS_position | 408 | |||||||
Protein_position | 136 | |||||||
Exon_number | 5/7 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |