WormBase Tree Display for Variation: WBVar01689494
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WBVar01689494 | Name | Public_name | WBVar01689494 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00381483 | |||||||
Y50D4C.1d.1:c.453-859C>T | ||||||||
Y50D4C.1b.1:c.441-859C>T | ||||||||
Y50D4C.1a.1:c.483-859C>T | ||||||||
Y50D4C.1c.1:c.483-859C>T | ||||||||
Y50D4C.1e.1:c.60-859C>T | ||||||||
HGVSg | CHROMOSOME_V:g.989377C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | ||||
Flanking_sequences | TTTTAATTTTCAGAAAACCCAAAAAAAAAA | ACTGAAAATATTATTTTAAAAATCGTTTTT | ||||||
Mapping_target | Y50D4C | |||||||
Source_location | 225 | CHROMOSOME_V | 989378 | 989378 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006770 | ||||||
Transcript | Y50D4C.1d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1d.1:c.453-859C>T | |||||||
Intron_number | 2/5 | |||||||
Y50D4C.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1e.1:c.60-859C>T | |||||||
Intron_number | 1/4 | |||||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1a.1:c.483-859C>T | |||||||
Intron_number | 3/7 | |||||||
Y50D4C.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1b.1:c.441-859C>T | |||||||
Intron_number | 2/2 | |||||||
Y50D4C.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1c.1:c.483-859C>T | |||||||
Intron_number | 3/3 | |||||||
Method | WGS_Flibotte |