WormBase Tree Display for Variation: WBVar01681817
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WBVar01681817 | Name | Public_name | WBVar01681817 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00372401 | |||||||
CE50758:p.Asp6= | ||||||||
K01A2.5b.1:c.18C>T | ||||||||
K01A2.5a.2:c.639C>T | ||||||||
CE19513:p.Asp213= | ||||||||
K01A2.5a.1:c.639C>T | ||||||||
HGVSg | CHROMOSOME_II:g.303443C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | K01A2 | ||||
Flanking_sequences | CCCGACACTAGTGATGAATGGTGGATTGGA | CGGTTCTGTGGTGACCCGAATGTATGCTTC | ||||||
Mapping_target | K01A2 | |||||||
Source_location | 225 | CHROMOSOME_II | 303443 | 303443 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019280 | ||||||
Transcript | K01A2.5a.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | K01A2.5a.2:c.639C>T | |||||||
HGVSp | CE19513:p.Asp213= | |||||||
cDNA_position | 765 | |||||||
CDS_position | 639 | |||||||
Protein_position | 213 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
K01A2.5b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K01A2.5b.1:c.18C>T | |||||||
HGVSp | CE50758:p.Asp6= | |||||||
cDNA_position | 18 | |||||||
CDS_position | 18 | |||||||
Protein_position | 6 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
K01A2.5a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K01A2.5a.1:c.639C>T | |||||||
HGVSp | CE19513:p.Asp213= | |||||||
cDNA_position | 649 | |||||||
CDS_position | 639 | |||||||
Protein_position | 213 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |