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WormBase Tree Display for Variation: WBVar01681418

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Name Class

WBVar01681418NamePublic_nameWBVar01681418
Other_namecewivar00371825
C43E11.2b.2:c.-646T>A
C43E11.2a.1:c.624+84T>A
C43E11.2b.1:c.-646T>A
C43E11.2b.3:c.-163+84T>A
HGVSgCHROMOSOME_I:g.4265922T>A
Sequence_detailsSMapS_parentSequenceC43E11
Flanking_sequencesCGGCAAGTAATAGAAAATCCAATGGAAAATAAAAAAAAAAGATTTTTGAACTCCCTCCGA
Mapping_targetC43E11
Source_location225CHROMOSOME_I42659234265923From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006640From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00016602
TranscriptC43E11.2b.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC43E11.2b.2:c.-646T>A
cDNA_position520
Exon_number1/4
C43E11.2b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC43E11.2b.1:c.-646T>A
cDNA_position710
Exon_number3/6
C43E11.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC43E11.2a.1:c.624+84T>A
Intron_number3/5
C43E11.2b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC43E11.2b.3:c.-163+84T>A
Intron_number1/4
MethodWGS_Flibotte