WormBase Tree Display for Variation: WBVar01681418
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WBVar01681418 | Name | Public_name | WBVar01681418 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00371825 | |||||||
C43E11.2b.2:c.-646T>A | ||||||||
C43E11.2a.1:c.624+84T>A | ||||||||
C43E11.2b.1:c.-646T>A | ||||||||
C43E11.2b.3:c.-163+84T>A | ||||||||
HGVSg | CHROMOSOME_I:g.4265922T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C43E11 | ||||
Flanking_sequences | CGGCAAGTAATAGAAAATCCAATGGAAAAT | AAAAAAAAAAGATTTTTGAACTCCCTCCGA | ||||||
Mapping_target | C43E11 | |||||||
Source_location | 225 | CHROMOSOME_I | 4265923 | 4265923 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016602 | ||||||
Transcript | C43E11.2b.2 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C43E11.2b.2:c.-646T>A | |||||||
cDNA_position | 520 | |||||||
Exon_number | 1/4 | |||||||
C43E11.2b.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C43E11.2b.1:c.-646T>A | |||||||
cDNA_position | 710 | |||||||
Exon_number | 3/6 | |||||||
C43E11.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C43E11.2a.1:c.624+84T>A | |||||||
Intron_number | 3/5 | |||||||
C43E11.2b.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C43E11.2b.3:c.-163+84T>A | |||||||
Intron_number | 1/4 | |||||||
Method | WGS_Flibotte |