WormBase Tree Display for Variation: WBVar01679789
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WBVar01679789 | Name | Public_name | WBVar01679789 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00370086 | |||||||
R07D5.1c.1:c.-461C>A | ||||||||
R07D5.1a.1:c.-9+5297C>A | ||||||||
HGVSg | CHROMOSOME_X:g.15142375G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C11G10 | ||||
Flanking_sequences | ATATGTGTTCAAAAGTGCTCACACATTTGT | GTGACGCTCCTTTCTCGGGGGGGAAGAAAC | ||||||
Mapping_target | C11G10 | |||||||
Source_location | 225 | CHROMOSOME_X | 15142305 | 15142305 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006747 | ||||||
Transcript | R07D5.1c.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1c.1:c.-461C>A | |||||||
cDNA_position | 21 | |||||||
Exon_number | 1/12 | |||||||
R07D5.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R07D5.1a.1:c.-9+5297C>A | |||||||
Intron_number | 1/12 | |||||||
Method | WGS_Flibotte |