WormBase Tree Display for Variation: WBVar01649257
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WBVar01649257 | Name | Public_name | WBVar01649257 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00336027 | |||||||
CE42187:p.Asp289= | ||||||||
Y38F2AL.1.1:c.867C>T | ||||||||
Y38F2AL.1.3:c.867C>T | ||||||||
Y38F2AL.1.2:c.867C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.2326458C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y38F2AL | ||||
Flanking_sequences | AAAATTCAGAGGCGCCTACCCCTCAAATGA | TTCCTCTCTTCGAGAATCCGCAGGAAAAGT | ||||||
Mapping_target | Y38F2AL | |||||||
Source_location | 225 | CHROMOSOME_IV | 2326458 | 2326458 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021415 | ||||||
Transcript | Y38F2AL.1.3 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y38F2AL.1.3:c.867C>T | |||||||
HGVSp | CE42187:p.Asp289= | |||||||
cDNA_position | 879 | |||||||
CDS_position | 867 | |||||||
Protein_position | 289 | |||||||
Exon_number | 7/8 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y38F2AL.1.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y38F2AL.1.2:c.867C>T | |||||||
HGVSp | CE42187:p.Asp289= | |||||||
cDNA_position | 972 | |||||||
CDS_position | 867 | |||||||
Protein_position | 289 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y38F2AL.1.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y38F2AL.1.1:c.867C>T | |||||||
HGVSp | CE42187:p.Asp289= | |||||||
cDNA_position | 873 | |||||||
CDS_position | 867 | |||||||
Protein_position | 289 | |||||||
Exon_number | 7/8 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |