WormBase Tree Display for Variation: WBVar01629774
expand all nodes | collapse all nodes | view schema
WBVar01629774 | Name | Public_name | WBVar01629774 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00311333 | |||||||
C54E4.4a.2:c.175-78A>G | ||||||||
C54E4.4a.1:c.175-78A>G | ||||||||
HGVSg | CHROMOSOME_IV:g.2163640T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C54E4 | ||||
Flanking_sequences | ATCACGTTGAGAGCATTCAGAAAAGTATAA | CATGTCGGGGTTCTGAGGATTTTCAAGATT | ||||||
Mapping_target | C54E4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 2163640 | 2163640 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016919 | ||||||
Transcript | C54E4.4a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54E4.4a.1:c.175-78A>G | |||||||
Intron_number | 4/6 | |||||||
C54E4.4a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54E4.4a.2:c.175-78A>G | |||||||
Intron_number | 3/5 | |||||||
Method | WGS_Flibotte |