WormBase Tree Display for Variation: WBVar01623808
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WBVar01623808 | Name | Public_name | WBVar01623808 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00303773 | |||||||
CE51202:p.Phe54Ser | ||||||||
T07D3.2.1:c.161T>C | ||||||||
HGVSg | CHROMOSOME_II:g.902092T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | TTGCTACTTGCTATTGGGATAACAATTGTT | TGTGAGATCCATTTAGACTTTAAATTCATT | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 902099 | 902099 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020305 | ||||||
Transcript | T07D3.2.1 | VEP_consequence | missense_variant,splice_region_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | T07D3.2.1:c.161T>C | |||||||
HGVSp | CE51202:p.Phe54Ser | |||||||
cDNA_position | 161 | |||||||
CDS_position | 161 | |||||||
Protein_position | 54 | |||||||
Exon_number | 1/4 | |||||||
Codon_change | tTt/tCt | |||||||
Amino_acid_change | F/S | |||||||
Method | WGS_Flibotte |