WormBase Tree Display for Variation: WBVar01623786
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WBVar01623786 | Name | Public_name | WBVar01623786 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00303751 | |||||||
CE51163:p.Val60= | ||||||||
T07D3.9b.1:c.180T>C | ||||||||
CE32064:p.Val105= | ||||||||
T07D3.9a.2:c.315T>C | ||||||||
T07D3.9a.1:c.315T>C | ||||||||
HGVSg | CHROMOSOME_II:g.899963A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | GTCCAGGTCTTCCAGAATTTTGCCAAGACG | ACACTTCTTGCGGCGCTCAGGTACTGCTTC | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 899970 | 899970 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020311 | ||||||
Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.1:c.315T>C | |||||||
HGVSp | CE32064:p.Val105= | |||||||
cDNA_position | 322 | |||||||
CDS_position | 315 | |||||||
Protein_position | 105 | |||||||
Exon_number | 4/9 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
T07D3.9b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9b.1:c.180T>C | |||||||
HGVSp | CE51163:p.Val60= | |||||||
cDNA_position | 332 | |||||||
CDS_position | 180 | |||||||
Protein_position | 60 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
T07D3.9a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.2:c.315T>C | |||||||
HGVSp | CE32064:p.Val105= | |||||||
cDNA_position | 368 | |||||||
CDS_position | 315 | |||||||
Protein_position | 105 | |||||||
Exon_number | 5/10 | |||||||
Codon_change | gtT/gtC | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |