WormBase Tree Display for Variation: WBVar01623773
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WBVar01623773 | Name | Public_name | WBVar01623773 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00303735 | |||||||
T07D3.9a.2:c.711T>C | ||||||||
CE51163:p.Phe192= | ||||||||
T07D3.9b.1:c.576T>C | ||||||||
CE32064:p.Phe237= | ||||||||
T07D3.9a.1:c.711T>C | ||||||||
HGVSg | CHROMOSOME_II:g.899444A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | T07D3 | ||||
Flanking_sequences | CTGCTTGTTCGTCGAGCTGCCCATCCGCCT | AAGTGCTCCTTTGTCTTGTTAATAGTTTCG | ||||||
Mapping_target | T07D3 | |||||||
Source_location | 225 | CHROMOSOME_II | 899451 | 899451 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020311 | ||||||
Transcript | T07D3.9a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.1:c.711T>C | |||||||
HGVSp | CE32064:p.Phe237= | |||||||
cDNA_position | 718 | |||||||
CDS_position | 711 | |||||||
Protein_position | 237 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
T07D3.9b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9b.1:c.576T>C | |||||||
HGVSp | CE51163:p.Phe192= | |||||||
cDNA_position | 728 | |||||||
CDS_position | 576 | |||||||
Protein_position | 192 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
T07D3.9a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T07D3.9a.2:c.711T>C | |||||||
HGVSp | CE32064:p.Phe237= | |||||||
cDNA_position | 764 | |||||||
CDS_position | 711 | |||||||
Protein_position | 237 | |||||||
Exon_number | 7/10 | |||||||
Codon_change | ttT/ttC | |||||||
Amino_acid_change | F | |||||||
Method | WGS_Flibotte |