WormBase Tree Display for Variation: WBVar01622707
expand all nodes | collapse all nodes | view schema
WBVar01622707 | Name | Public_name | WBVar01622707 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00302544 | |||||||
Y54E10A.4a.1:c.86-216G>A | ||||||||
Y54E10A.4b.1:c.728-216G>A | ||||||||
Y54E10A.4a.2:c.86-216G>A | ||||||||
HGVSg | CHROMOSOME_I:g.3213583G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y54E10A | ||||
Flanking_sequences | CCTAAATGAAGTTGAAAACGCAAGATAATTACATTGTATACTCAAGTGATTTCAAAAAAATCAGTTTCCA | CCGCTTGACAAGTCGGTCAAATTTCAAATT | ||||||
Mapping_target | Y54E10A | |||||||
Source_location | 225 | CHROMOSOME_I | 3213585 | 3213585 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001481 | ||||||
Transcript | Y54E10A.4a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4a.1:c.86-216G>A | |||||||
Intron_number | 6/10 | |||||||
Y54E10A.4b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4b.1:c.728-216G>A | |||||||
Intron_number | 6/9 | |||||||
Y54E10A.4a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y54E10A.4a.2:c.86-216G>A | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |