WormBase Tree Display for Variation: WBVar01620534
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WBVar01620534 | Name | Public_name | WBVar01620534 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00300225 | |||||||
C34F6.10b.1:c.101+580T>G | ||||||||
C34F6.10c.1:c.101+580T>G | ||||||||
C34F6.10a.1:c.-17+580T>G | ||||||||
C34F6.10d.1:c.-17+580T>G | ||||||||
HGVSg | CHROMOSOME_X:g.11239930A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C03A3 | ||||
Flanking_sequences | ATAATAATTCAACAAGGCAAGTTCATTTCA | AGAGAAATTCACAGACATGCTAAGAAAAAA | ||||||
Mapping_target | C03A3 | |||||||
Source_location | 225 | CHROMOSOME_X | 11239865 | 11239865 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007944 | ||||||
Transcript | C34F6.10d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C34F6.10d.1:c.-17+580T>G | |||||||
Intron_number | 1/16 | |||||||
C34F6.10c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C34F6.10c.1:c.101+580T>G | |||||||
Intron_number | 2/15 | |||||||
C34F6.10b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C34F6.10b.1:c.101+580T>G | |||||||
Intron_number | 2/16 | |||||||
C34F6.10a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C34F6.10a.1:c.-17+580T>G | |||||||
Intron_number | 1/17 | |||||||
Method | WGS_Flibotte |