WormBase Tree Display for Variation: WBVar01609926
expand all nodes | collapse all nodes | view schema
WBVar01609926 | Name | Public_name | WBVar01609926 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00289134 | |||||||
Y50D4C.1e.1:c.481+300T>A | ||||||||
Y50D4C.1a.1:c.904+300T>A | ||||||||
Y50D4C.1f.1:c.127+300T>A | ||||||||
Y50D4C.1d.1:c.874+300T>A | ||||||||
HGVSg | CHROMOSOME_V:g.990957T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | ||||
Flanking_sequences | GTATATATTATAAAAGACGAAAAAAAAGTT | AAAAAAAGGGTTATTTTGCGCTTGTCTGGG | ||||||
Mapping_target | Y50D4C | |||||||
Source_location | 225 | CHROMOSOME_V | 990958 | 990958 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006770 | ||||||
Transcript | Y50D4C.1d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1d.1:c.874+300T>A | |||||||
Intron_number | 3/5 | |||||||
Y50D4C.1e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1e.1:c.481+300T>A | |||||||
Intron_number | 2/4 | |||||||
Y50D4C.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1a.1:c.904+300T>A | |||||||
Intron_number | 4/7 | |||||||
Y50D4C.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y50D4C.1f.1:c.127+300T>A | |||||||
Intron_number | 1/3 | |||||||
Method | WGS_Flibotte |