WormBase Tree Display for Variation: WBVar01608690
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WBVar01608690 | Name | Public_name | WBVar01608690 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00287818 | |||||||
Y55F3BR.2a.1:c.2331-483A>T | ||||||||
Y55F3BR.2b.1:c.1452-483A>T | ||||||||
HGVSg | CHROMOSOME_IV:g.868179A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55F3BR | ||||
Flanking_sequences | GCGTTCGGCGATTGCCGATCGCCGATGGAA | TTTTTTTTCGGCGATCGGCAATCGTCGATC | ||||||
Mapping_target | Y55F3BR | |||||||
Source_location | 225 | CHROMOSOME_IV | 868179 | 868179 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021939 | ||||||
Transcript | Y55F3BR.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3BR.2b.1:c.1452-483A>T | |||||||
Intron_number | 9/15 | |||||||
Y55F3BR.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55F3BR.2a.1:c.2331-483A>T | |||||||
Intron_number | 17/24 | |||||||
Method | WGS_Flibotte |