WormBase Tree Display for Variation: WBVar01604532
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WBVar01604532 | Name | Public_name | WBVar01604532 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00281219 | |||||||
F26C11.1.1:c.117A>T | ||||||||
F26C11.1.2:c.117A>T | ||||||||
CE01559:p.Gly39= | ||||||||
HGVSg | CHROMOSOME_II:g.9895767A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F26C11 | ||||
Flanking_sequences | ATTTTCAAACTTTCAGATTTGGCGGCATGG | GATCGTTCCGCGCTAGAAGGATTATTCCCG | ||||||
Mapping_target | F26C11 | |||||||
Source_location | 225 | CHROMOSOME_II | 9895708 | 9895708 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009146 | ||||||
Transcript | F26C11.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F26C11.1.1:c.117A>T | |||||||
HGVSp | CE01559:p.Gly39= | |||||||
cDNA_position | 124 | |||||||
CDS_position | 117 | |||||||
Protein_position | 39 | |||||||
Exon_number | 3/10 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
F26C11.1.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F26C11.1.2:c.117A>T | |||||||
HGVSp | CE01559:p.Gly39= | |||||||
cDNA_position | 214 | |||||||
CDS_position | 117 | |||||||
Protein_position | 39 | |||||||
Exon_number | 4/11 | |||||||
Codon_change | ggA/ggT | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |