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WormBase Tree Display for Variation: WBVar01602920

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Name Class

WBVar01602920NamePublic_nameWBVar01602920
Other_namecewivar00278435
Y54E10A.4c.1:c.820-493G>T
Y54E10A.4a.1:c.985-493G>T
Y54E10A.4a.2:c.985-493G>T
Y54E10A.4b.1:c.1627-493G>T
HGVSgCHROMOSOME_I:g.3216295G>T
Sequence_detailsSMapS_parentSequenceY54E10A
Flanking_sequencesGAAAAGAAAATGCCGAATGAATTTGCGCGGAATTCAAAAATAATTTAACTCAATTTTTGG
Mapping_targetY54E10A
Source_location225CHROMOSOME_I32162973216297From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00022886From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001481
TranscriptY54E10A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.1:c.985-493G>T
Intron_number9/10
Y54E10A.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4c.1:c.820-493G>T
Intron_number3/3
Y54E10A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4b.1:c.1627-493G>T
Intron_number9/9
Y54E10A.4a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E10A.4a.2:c.985-493G>T
Intron_number5/6
MethodWGS_Flibotte