WormBase Tree Display for Variation: WBVar01600717
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| WBVar01600717 | Name | Public_name | WBVar01600717 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00269373 | |||||||
| K06A9.1b.1:c.7207+1244A>G | ||||||||
| K06A9.1d.1:c.3533-2067A>G | ||||||||
| K06A9.1c.1:c.1895-2067A>G | ||||||||
| K06A9.1g.1:c.5102-2067A>G | ||||||||
| K06A9.1e.1:c.4280-2067A>G | ||||||||
| K06A9.1a.1:c.2771-2067A>G | ||||||||
| K06A9.1f.1:c.4826-2067A>G | ||||||||
| HGVSg | CHROMOSOME_X:g.1556388A>G | |||||||
| Sequence_details | SMap | S_parent | Sequence | H02F09 | ||||
| Flanking_sequences | CACAAGGATATATTCAAGTACTTCAGTATT | TCCAGCTCTGTCACAACAAGTTCTTCGCCT | ||||||
| Mapping_target | H02F09 | |||||||
| Source_location | 225 | CHROMOSOME_X | 1556383 | 1556383 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | A | G | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00019435 | ||||||
| Transcript | K06A9.1d.1 | VEP_consequence | intron_variant | |||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1d.1:c.3533-2067A>G | |||||||
| Intron_number | 7/12 | |||||||
| K06A9.1c.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1c.1:c.1895-2067A>G | |||||||
| Intron_number | 8/14 | |||||||
| K06A9.1b.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1b.1:c.7207+1244A>G | |||||||
| Intron_number | 8/13 | |||||||
| K06A9.1g.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1g.1:c.5102-2067A>G | |||||||
| Intron_number | 7/12 | |||||||
| K06A9.1e.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1e.1:c.4280-2067A>G | |||||||
| Intron_number | 7/12 | |||||||
| K06A9.1f.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1f.1:c.4826-2067A>G | |||||||
| Intron_number | 7/12 | |||||||
| K06A9.1a.1 | VEP_consequence | intron_variant | ||||||
| VEP_impact | MODIFIER | |||||||
| HGVSc | K06A9.1a.1:c.2771-2067A>G | |||||||
| Intron_number | 8/14 | |||||||
| Method | WGS_Flibotte |
