WormBase Tree Display for Variation: WBVar01598662
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WBVar01598662 | Name | Public_name | WBVar01598662 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00264765 | |||||||
Y60A3A.1.1:c.1629T>G | ||||||||
CE24516:p.Ala543= | ||||||||
HGVSg | CHROMOSOME_V:g.19998887A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y60A3A | ||||
Flanking_sequences | CTGCGGCGGCGAAGTGACCGATCGATCGCG | GCGCCACGTGGAATTCCCTGGATGTTGGCT | ||||||
Mapping_target | Y60A3A | |||||||
Source_location | 225 | CHROMOSOME_V | 19998856 | 19998856 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006786 | ||||||
Transcript | Y60A3A.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y60A3A.1.1:c.1629T>G | |||||||
HGVSp | CE24516:p.Ala543= | |||||||
cDNA_position | 1694 | |||||||
CDS_position | 1629 | |||||||
Protein_position | 543 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | gcT/gcG | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |