WormBase Tree Display for Variation: WBVar01590972
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WBVar01590972 | Name | Public_name | WBVar01590972 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00246641 | |||||||
CE32029:p.Leu111= | ||||||||
CE16585:p.Leu111= | ||||||||
Y6E2A.9a.1:c.333C>T | ||||||||
Y6E2A.9b.1:c.333C>T | ||||||||
HGVSg | CHROMOSOME_V:g.15727577C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y6E2A | ||||
Flanking_sequences | AGCAAATATGGTTATCACTGGAATGCTTCT | AGCTGCTATCGTACCTGTCCTGGTATTATA | ||||||
Mapping_target | Y6E2A | |||||||
Source_location | 225 | CHROMOSOME_V | 15727558 | 15727558 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012402 | ||||||
Transcript | Y6E2A.9a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y6E2A.9a.1:c.333C>T | |||||||
HGVSp | CE16585:p.Leu111= | |||||||
cDNA_position | 359 | |||||||
CDS_position | 333 | |||||||
Protein_position | 111 | |||||||
Exon_number | 4/7 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Y6E2A.9b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y6E2A.9b.1:c.333C>T | |||||||
HGVSp | CE32029:p.Leu111= | |||||||
cDNA_position | 333 | |||||||
CDS_position | 333 | |||||||
Protein_position | 111 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |