WormBase Tree Display for Variation: WBVar01589571
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WBVar01589571 | Name | Public_name | WBVar01589571 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00238578 | |||||||
F07C4.2.1:c.336T>A | ||||||||
CE09201:p.Gly112= | ||||||||
HGVSg | CHROMOSOME_V:g.7638440T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F07C4 | ||||
Flanking_sequences | GGCTGACGGGAGCAAGTTCTCGTTTGATGG | TTTGCTGAGGGTATGTAACTTCATATTTTC | ||||||
Mapping_target | F07C4 | |||||||
Source_location | 225 | CHROMOSOME_V | 7638421 | 7638421 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00017199 | ||||||
Transcript | F07C4.2.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F07C4.2.1:c.336T>A | |||||||
HGVSp | CE09201:p.Gly112= | |||||||
cDNA_position | 340 | |||||||
CDS_position | 336 | |||||||
Protein_position | 112 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | ggT/ggA | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |