WormBase Tree Display for Variation: WBVar01577639
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WBVar01577639 | Name | Public_name | WBVar01577639 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00191056 | |||||||
C29F9.6.2:c.652+6C>T | ||||||||
C29F9.6.1:c.652+6C>T | ||||||||
C29F9.6.3:c.652+6C>T | ||||||||
HGVSg | CHROMOSOME_III:g.116382C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F9 | ||||
Flanking_sequences | CAAAAAGAGGAGAAGGGGGCTGGAGGTAGA | TTTTAGTCAGGTGTAATTTAAGTAATATGG | ||||||
Mapping_target | C29F9 | |||||||
Source_location | 225 | CHROMOSOME_III | 116381 | 116381 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016221 | ||||||
Transcript | C29F9.6.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.1:c.652+6C>T | |||||||
Intron_number | 7/8 | |||||||
C29F9.6.3 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.3:c.652+6C>T | |||||||
Intron_number | 6/7 | |||||||
C29F9.6.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F9.6.2:c.652+6C>T | |||||||
Intron_number | 5/6 | |||||||
Method | WGS_Flibotte |