WormBase Tree Display for Variation: WBVar01572236
expand all nodes | collapse all nodes | view schema
WBVar01572236 | Name | Public_name | WBVar01572236 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00158779 | |||||||
F09A5.4a.1:c.59+636A>T | ||||||||
F09A5.4e.1:c.132-2299A>T | ||||||||
F09A5.4c.1:c.210-2299A>T | ||||||||
HGVSg | CHROMOSOME_X:g.13157777T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F09A5 | ||||
Flanking_sequences | GAGCCTCTGACTACATATGACTAATTTGAA | TTTGATACAATCAAAATTGAATATTTTTCC | ||||||
Mapping_target | F09A5 | |||||||
Source_location | 225 | CHROMOSOME_X | 13157707 | 13157707 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008601 | ||||||
Transcript | F09A5.4c.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F09A5.4c.1:c.210-2299A>T | |||||||
Intron_number | 3/7 | |||||||
F09A5.4a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F09A5.4a.1:c.59+636A>T | |||||||
Intron_number | 2/6 | |||||||
F09A5.4e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F09A5.4e.1:c.132-2299A>T | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |