WormBase Tree Display for Variation: WBVar01567452
expand all nodes | collapse all nodes | view schema
WBVar01567452 | Name | Public_name | WBVar01567452 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00151977 | |||||||
Y39A1A.9.1:c.567A>C | ||||||||
CE38117:p.Pro189= | ||||||||
HGVSg | CHROMOSOME_III:g.10631503T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y39A1A | ||||
Flanking_sequences | GTTCCAGTACATATTCTGCTGTGGGGCTGG | GGAGATGTGCGTGCGATCGGTGCCGGGCGA | ||||||
Mapping_target | Y39A1A | |||||||
Source_location | 225 | CHROMOSOME_III | 10631404 | 10631404 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012648 | ||||||
Transcript | Y39A1A.9.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y39A1A.9.1:c.567A>C | |||||||
HGVSp | CE38117:p.Pro189= | |||||||
cDNA_position | 569 | |||||||
CDS_position | 567 | |||||||
Protein_position | 189 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | ccA/ccC | |||||||
Amino_acid_change | P | |||||||
Method | WGS_Flibotte |