WormBase Tree Display for Variation: WBVar01567200
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WBVar01567200 | Name | Public_name | WBVar01567200 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00151642 | |||||||
R10E11.7.1:c.1002G>A | ||||||||
ZK632.1a.1:c.811+28C>T | ||||||||
CE47925:p.Lys334= | ||||||||
HGVSg | CHROMOSOME_III:g.9795302C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | R10E11 | ||||
Flanking_sequences | GAGGTAAACAATTTTATTCGAAACTCATTT | TTAGTGGAAGTAGTTGTCGCAGATACCTTG | ||||||
Mapping_target | R10E11 | |||||||
Source_location | 225 | CHROMOSOME_III | 9795216 | 9795216 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00011219 | ||||||
WBGene00003158 | ||||||||
Transcript | ZK632.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | ZK632.1a.1:c.811+28C>T | |||||||
Intron_number | 4/6 | |||||||
R10E11.7.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | R10E11.7.1:c.1002G>A | |||||||
HGVSp | CE47925:p.Lys334= | |||||||
cDNA_position | 1002 | |||||||
CDS_position | 1002 | |||||||
Protein_position | 334 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |