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WormBase Tree Display for Variation: WBVar01566026

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Name Class

WBVar01566026NamePublic_nameWBVar01566026
Other_namecewivar00149802
Y55D5A.5f.1:c.58+275A>G
Y55D5A.5c.1:c.2488+275A>G
Y55D5A.5e.1:c.2260+275A>G
Y55D5A.5d.1:c.2347+275A>G
Y55D5A.5a.1:c.2488+275A>G
HGVSgCHROMOSOME_III:g.3010136T>C
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTCCATCGATTTTTAAATATCTTAATCAAGTTAAAACGCAACATAATCAATTTTTATACT
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30101283010128From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2260+275A>G
Intron_number8/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.58+275A>G
Intron_number1/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2488+275A>G
Intron_number11/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2488+275A>G
Intron_number12/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2347+275A>G
Intron_number9/15
MethodWGS_Flibotte