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WormBase Tree Display for Variation: WBVar01566014

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Name Class

WBVar01566014NamePublic_nameWBVar01566014
Other_namecewivar00149785
Y55D5A.5a.1:c.5170-298A>T
Y55D5A.5e.1:c.4942-298A>T
Y55D5A.5d.1:c.5029-298A>T
Y55D5A.5f.1:c.2740-298A>T
Y55D5A.5c.1:c.5416-298A>T
Y55D5A.5g.1:c.1648-298A>T
HGVSgCHROMOSOME_III:g.2997633T>A
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesTTTTTAAACAATTTCGAAAAACGGTTTTTTAAATATTGAATTTATATCATTTAATTTCTT
Mapping_targetY55D5A
Source_location225CHROMOSOME_III29976252997625From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1648-298A>T
Intron_number2/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.4942-298A>T
Intron_number13/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.2740-298A>T
Intron_number6/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.5170-298A>T
Intron_number16/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5416-298A>T
Intron_number18/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.5029-298A>T
Intron_number14/15
MethodWGS_Flibotte