WormBase Tree Display for Variation: WBVar01564987
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WBVar01564987 | Name | Public_name | WBVar01564987 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00147985 | |||||||
Y71D11A.3a.1:c.418-7697A>T | ||||||||
Y71D11A.5.1:c.532+1800T>A | ||||||||
Y71D11A.3b.1:c.418-6772A>T | ||||||||
HGVSg | CHROMOSOME_III:g.1132298A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71D11A | ||||
Flanking_sequences | AGGTTTGGAAAATTTCAGAAAAATTTTTTT | AAATTTATTTTGAAATTTTGGATCTCGTCA | ||||||
Mapping_target | Y71D11A | |||||||
Source_location | 225 | CHROMOSOME_III | 1132288 | 1132288 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022106 | ||||||
WBGene00022104 | ||||||||
Transcript | Y71D11A.3b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71D11A.3b.1:c.418-6772A>T | |||||||
Intron_number | 5/9 | |||||||
Y71D11A.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71D11A.3a.1:c.418-7697A>T | |||||||
Intron_number | 6/9 | |||||||
Y71D11A.5.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71D11A.5.1:c.532+1800T>A | |||||||
Intron_number | 6/13 | |||||||
Method | WGS_Flibotte |