WormBase Tree Display for Variation: WBVar01564192
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WBVar01564192 | Name | Public_name | WBVar01564192 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00146734 | |||||||
C09F5.1b.1:c.684A>G | ||||||||
CE52548:p.Glu228= | ||||||||
CE44860:p.Glu421= | ||||||||
C09F5.1a.1:c.1263A>G | ||||||||
HGVSg | CHROMOSOME_III:g.661380A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | C09F5 | ||||
Flanking_sequences | CTCTGAAGCTGTATCCGAGTCAAGTTATGA | GTTAGTTTTAAGACTGAACCAACCTTCAAT | ||||||
Mapping_target | C09F5 | |||||||
Source_location | 225 | CHROMOSOME_III | 661377 | 661377 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00015647 | ||||||
Transcript | C09F5.1a.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C09F5.1a.1:c.1263A>G | |||||||
HGVSp | CE44860:p.Glu421= | |||||||
cDNA_position | 1280 | |||||||
CDS_position | 1263 | |||||||
Protein_position | 421 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
C09F5.1b.1 | VEP_consequence | splice_region_variant,synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C09F5.1b.1:c.684A>G | |||||||
HGVSp | CE52548:p.Glu228= | |||||||
cDNA_position | 703 | |||||||
CDS_position | 684 | |||||||
Protein_position | 228 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | gaA/gaG | |||||||
Amino_acid_change | E | |||||||
Method | WGS_Flibotte |