WormBase Tree Display for Variation: WBVar01550541
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WBVar01550541 | Name | Public_name | WBVar01550541 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00127499 | |||||||
CE52663:p.Asn190= | ||||||||
CE53594:p.Asn190= | ||||||||
K09F5.1b.1:c.570C>T | ||||||||
K09F5.1a.1:c.570C>T | ||||||||
HGVSg | CHROMOSOME_X:g.7740276C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | K09F5 | ||||
Flanking_sequences | GACAATTGATAAGAGTTTTGAAGTGGCAAA | GTAAATTGTAAGTTAGCAAATTCGAATTGA | ||||||
Mapping_target | K09F5 | |||||||
Source_location | 225 | CHROMOSOME_X | 7740225 | 7740225 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019582 | ||||||
Transcript | K09F5.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | K09F5.1b.1:c.570C>T | |||||||
HGVSp | CE53594:p.Asn190= | |||||||
cDNA_position | 570 | |||||||
CDS_position | 570 | |||||||
Protein_position | 190 | |||||||
Exon_number | 2/5 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
K09F5.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | K09F5.1a.1:c.570C>T | |||||||
HGVSp | CE52663:p.Asn190= | |||||||
cDNA_position | 570 | |||||||
CDS_position | 570 | |||||||
Protein_position | 190 | |||||||
Exon_number | 2/5 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
Method | WGS_Flibotte |